Protein ZmOrphan278
ZmOrphan278 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan278
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym):
Uniprot ID: B4F8R0
Subgenome: 1

Protein ZmOrphan278

ZmOrphan278 is a protein in the Orphans family.

Overview of domains present in v5 transcripts
PF00481
Zm00001eb324540_T001
Zm00001eb324540_T002
Zm00001eb324540_T003

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d021817DAPseq no logo sequence fimo position
Zm00001d021817DAPseq no logo sequence fimo position
Zm00001d021817ChIPseq no logo sequence fimo position
Zm00001d021817PChIPseq no logo sequence fimo position

Interactions where ZmOrphan278 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan278 is the target  
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There are 160 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb324540_T001 from maize genome v5

Amino Acid Sequence
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MGNCVASGGTTTVTAAGAAGEDGRRRGRRWKAPREEQLGSVPGRIFSNDGRSRTAAVFTQQGRKGINQDAMLVWDGFGGE
EDVVLCGVFDGHGPHGHLVARRVRDAMPLKLMSAVRASKAGLDMPAAAWRKAFARAYKTMDKDLRSHATLDCFCSGSTAV
TVLKLGSDLYMANIGDSRAVLGSRDGGDGGMVALQLTIDLKPDVPSEAERIKKCRGRVFALQDEPEVPRVWLPFDDAPGL
AMARAFGDFCLKDYGVISVPEFFHWSLTEKDQFVILASDGVWDVLSNQEAVDIVSSSPSRSKAARSLVEAATREWKTKYP
TSKIDDCAVVCLYLDGKMDHERDSTASMDNMSLDEGSAADPNEAQEQEPALTRNFTVRTVAGSAHEKALSGAVDVVVAGA
AHDQSWSGLDGVTRVNSLVQLPRFSDEKAIG

MGNCVASGGTTTVTAAGAAGEDGRRRGRRWKAPREEQLGSVPGRIFSNDGRSRTAAVFTQQGRKGINQDAMLVWDGFGGE
EDVVLCGVFDGHGPHGHLVARRVRDAMPLKLMSAVRASKAGLDMPAAAWRKAFARAYKTMDKDLRSHATLDCFCSGSTAV
TVLKLGSDLYMANIGDSRAVLGSRDGGDGGMVALQLTIDLKPDVPSEAERIKKCRGRVFALQDEPEVPRVWLPFDDAPGL
AMARAFGDFCLKDYGVISVPEFFHWSLTEKDQFVILASDGVWDVLSNQEAVDIVSSSPSRSKAARSLVEAATREWKTKYP
TSKIDDCAVVCLYLDGKMDHERDSTASMDNMSLDEGSAADPNEAQEQEPALTRNFTVRTVAGSAHEKALSGAVDVVVAGA
AHDQSWSGLDGVTRVNSLVQLPRFSDEKAIG

MGNCVASGGTTTVTAAGAAGEDGRRRGRRWKAPREEQLGSVPGRIFSNDGRSRTAAVFTQQGRKGINQDAMLVWDGFGGE
EDVVLCGVFDGHGPHGHLVARRVRDAMPLKLMSAVRASKAGLDMPAAAWRKAFARAYKTMDKDLRSHATLDCFCSGSTAV
TVLKLGSDLYMANIGDSRAVLGSRDGGDGGMVALQLTIDLKPDVPSEAERIKKCRGRVFALQDEPEVPRVWLPFDDAPGL
AMARAFGDFCLKDYGVISVPEFFHWSLTEKDQFVILASDGVWDVLSNQEAVDIVSSSPSRSKAARSLVEAATREWKTKYP
TSKIDDCAVVCLYLDGKMDHERDSTASMDNMSLDEGSAADPNEAQEQEPALTRNFTVRTVAGSAHEKALSGAVDVVVAGA
AHDQSWSGLDGVTRVNSLVQLPRFSDEKAIG

MGNCVASGGTTTVTAAGAAGEDGRRRGRRWKAPREEQLGSVPGRIFSNDGRSRTAAVFTQQGRKGINQDAMLVWDGFGGE
EDVVLCGVFDGHGPHGHLVARRVRDAMPLKLMSAVRASKAGLDMPAAAWRKAFARAYKTMDKDLRSHATLDCFCSGSTAV
TVLKLGSDLYMANIGDSRAVLGSRDGGDGGMVALQLTIDLKPDVPSEAERIKKCRGRVFALQDEPEVPRVWLPFDDAPGL
AMARAFGDFCLKDYGVISVPEFFHWSLTEKDQFVILASDGVWDVLSNQEAVDIVSSSPSRSKAARSLVEAATREWKTKYP
TSKIDDCAVVCLYLDGKMDHERDSTASMDNMSLDEGSAADPNEAQEQEPALTRNFTVRTVAGSAHEKALSGAVDVVVAGA
AHDQSWSGLDGVTRVNSLVQLPRFSDEKAIG

MGNCVASGGTTTVTAAGAAGEDGRRRGRRWKAPREEQLGSVPGRIFSNDGRSRTAAVFTQQGRKGINQDAMLVWDGFGGE
EDVVLCGVFDGHGPHGHLVARRVRDAMPLKLMSAVRASKAGLDMPAAAWRKAFARAYKTMDKDLRSHATLDCFCSGSTAV
TVLKLGSDLYMANIGDSRAVLGSRDGGDGGMVALQLTIDLKPDVPSEAERIKKCRGRVFALQDEPEVPRVWLPFDDAPGL
AMARAFGDFCLKDYGVISVPEFFHWSLTEKDQFVILASDGVWDVLSNQEAVDIVSSSPSRSKAARSLVEAATREWKTKYP
TSKIDDCAVVCLYLDGKMDHERDSTASMDNMSLDEGSAADPNEAQEQEPALTRNFTVRTVAGSAHEKALSGAVDVVVAGA
AHDQSWSGLDGVTRVNSLVQLPRFSDEKAIG

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00481
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Nucleotide Sequence
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GCCTCTTCTTTCTCCGTGAATGGGA...

GRMZM2G107565_T01 from maize genome v3


Related TFome: pUT6019

Amino Acid Sequence
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MGNCVASGGTTTVTAAGAAGEDGRRRGRRWKAPREEQLGSVPGRIFSNDGRSRTAAVFTQQGRKGINQDAMLVWDGFGGE
EDVVLCGVFDGHGPHGHLVARRVRDAMPLKLMSAVRASKAGLDMPAAAWRKAFARAYKTMDKDLRSHATLDCFCSGSTAV
TVLKLGSDLYMANIGDSRAVLGSRDGGDGGMVALQLTIDLKPDVPSEAERIKKCRGRVFALQDEPEVPRVWLPFDDAPGL
AMARAFGDFCLKDYGVISVPEFFHWSLTEKDQFVILASDGVWDVLSNQEAVDIVSSSPSRSKAARSLVEAATREWKTKYP
TSKIDDCAVVCLYLDGKMDHERDSTASMDNMSLDEGSAADPNEAQEQEPALTRNFTVRTVAGSAHEKALSGAVDVVVAGA
AHDQSWSGLDGVTRVNSLVQLPRFSDEKAIG

Nucleotide Sequence
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AATCCAGCAACGCCGACGACCGGTC...

GRMZM2G107565_T02 from maize genome v3

Amino Acid Sequence
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MLVWDGFGGEEDVVLCGVFDGHGPHGHLVARRVRDAMPLKLMSAVRASKAGLDMPAAAWRKAFARAYKTMDKDLRSHATL
DCFCSGSTAVTVLKLGSDLYMANIGDSRAVLGSRDGGDGGMVALQLTIDLKPDVPSEAERIKKCRGRVFALQDEPEVPRV
WLPFDDAPGLAMARAFGDFCLKDYGVISVPEFFHWSLTEKDQFVILASDGVWDVLSNQEAVDIVSSSPSRSKAARSLVEA
ATREWKTKYPTSKIDDCAVVCLYLDGKMDHERDSTASMDNMSLDEGSAADPNEAQEQEPALTRNFTVRTVAGSAHEKALS
GAVDVVVAGAAHDQSWSGLDGVTRVNSLVQLPRFSDEKAIG

Nucleotide Sequence
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GGGACCCGCCCGCCTTGACTTTTCA...

Zm00001d021817_T001 from maize genome v4

Amino Acid Sequence
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MGNCVASGGTTTVTAAGAAGEDGRRRGRRWKAPREEQLGSVPGRIFSNDGRSRTAAVFTQQGRKGINQDAMLVWDGFGGE
EDVVLCGVFDGHGPHGHLVARRVRDAMPLKLMSAVRASKAGLDMPAAAWRKAFARAYKTMDKDLRSHATLDCFCSGSTAV
TVLKLGSDLYMANIGDSRAVLGSRDGGDGGMVALQLTIDLKPDVPSEAERIKKCRGRVFALQDEPEVPRVWLPFDDAPGL
AMARAFGDFCLKDYGVISVPEFFHWSLTEKDQFVILASDGVWDVLSNQEAVDIVSSSPSRSKAARSLVEAATREWKTKYP
TSKIDDCAVVCLYLDGKMDHERDSTASMDNMSLDEGSAADPNEAQEQEPALTRNFTVRTVAGSAHEKALSGAVDVVVAGA
AHDQSWSGLDGVTRVNSLVQLPRFSDEKAIG

Nucleotide Sequence
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CTCACTGCCTCTGCGTGCGTGCGTC...

Zm00001d021817_T002 from maize genome v4

Amino Acid Sequence
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MGNCVASGGTTTVTAAGAAGEDGRRRGRRWKAPREEQLGSVPGRIFSNDGRSRTAAVFTQQGRKGINQDAMLVWDGFGGE
EDVVLCGVFDGHGPHGHLVARRVRDAMPLKLMSAVRASKAGLDMPAAAWRKAFARAYKTMDKDLRSHATLDCFCSGSTAV
TVLKLGSDLYMANIGDSRAVLGSRDGGDGGMVALQLTIDLKPDVPSEAERIKKCRGRVFALQDEPEVPRVWLPFDDAPGL
AMARAFGDFCLKDYGVISVPEFFHWSLTEKDQFVILASDGVWDVLSNQEAVDIVSSSPSRSKAARSLVEAATREWKTKYP
TSKIDDCAVVCLYLDGKMDHERDSTASMDNMSLDEGSAADPNEAQEQEPALTRNFTVRTVAGSAHEKALSGAVDVVVAGA
AHDQSWSGLDGVTRVNSLVQLPRFSDEKAIG

Nucleotide Sequence
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CCCGTCCCCGACTCCCCGAGAGCCG...

Zm00001d021817_T003 from maize genome v4

Amino Acid Sequence
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MGNCVASGGTTTVTAAGAAGEDGRRRGRRWKAPREEQLGSVPGRIFSNDGRSRTAAVFTQQGRKGINQDAMLVWDGFGGE
EDVVLCGVFDGHGPHGHLVARRVRDAMPLKLMSAVRASKAGLDMPAAAWRKAFARAYKTMDKDLRSHATLDCFCSGSTAV
TVLKLGSDLYMANIGDSRAVLGSRDGGDGGMVALQLTIDLKPDVPSEAERIKKCRGRVFALQDEPEVPRVWLPFDDAPGL
AMARAFGDFCLKDYGVISVPEFFHWSLTEKDQFVILASDGVWDVLRDNMSLDEGSAADPNEAQEQEPALTRNFTVRTVAG
SAHEKALSGAVDVVVAGAAHDQSWSGLDGVTRVNSLVQLPRFSDEKAIG

Nucleotide Sequence
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ACTCCACACCTGAGAGGGAATCCTG...

Zm00001d021817_T004 from maize genome v4

Amino Acid Sequence
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MPLKLMSAVRASKAGLDMPAAAWRKAFARAYKTMDKDLRSHATLDCFCSGSTAVTVLKLGSDLYMANIGDSRAVLGSRDG
GDGGMVALQLTIDLKPDVPSEAERIKKCRGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKDYGVISVPEFFHWS
LTEKDQFVILASDGIMISQ

Nucleotide Sequence
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GGCAGGGGTTCGGCGGGGAGGAAGA...

Zm00001eb324540_T002 from maize genome v5

Amino Acid Sequence
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MGNCVASGGTTTVTAAGAAGEDGRRRGRRWKAPREEQLGSVPGRIFSNDGRSRTAAVFTQQGRKGINQDAMLVWDGFGGE
EDVVLCGVFDGHGPHGHLVARRVRDAMPLKLMSAVRASKAGLDMPAAAWRKAFARAYKTMDKDLRSHATLDCFCSGSTAV
TVLKLGSDLYMANIGDSRAVLGSRDGGDGGMVALQLTIDLKPDVPSEAERIKKCRGRVFALQDEPEVPRVWLPFDDAPGL
AMARAFGDFCLKDYGVISVPEFFHWSLTEKDQFVILASDGVWDVLSNQEAVDIVSSSPSRSKAATREWKTKYPTSKIDDC
AVVCLYLDGKMDHERDSTASMDNMSLDEGSAADPNEAQEQEPALTRNFTVRTVAGSAHEKALSGAVDVVVAGAAHDQSWS
GLDGVTRVNSLVQLPRFSDEKAIG

Nucleotide Sequence
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GCCTCTTCTTTCTCCGTGAATGGGA...

Zm00001eb324540_T003 from maize genome v5

Amino Acid Sequence
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MVVTVLECLSPWQGFGGEEDVVLCGVFDGHGPHGHLVARRVRDAMPLKLMSAVRASKAGLDMPAAAWRKAFARAYKTMDK
DLRSHATLDCFCSGSTAVTVLKLGSDLYMANIGDSRAVLGSRDGGDGGMVALQLTIDLKPDVPSEAERIKKCRGRVFALQ
DEPEVPRVWLPFDDAPGLAMARAFGDFCLKDYGVISVPEFFHWSLTEKDQFVILASDGVWDVLSNQEAVDIVSSSPSRSK
AARSLVEAATREWKTKYPTSKIDDCAVVCLYLDGKMDHERDSTASMDNMSLDEGSAADPNEAQEQEPALTRNFTVRTVAG
SAHEKALSGAVDVVVAGAAHDQSWSGLDGVTRVNSLVQLPRFSDEKAIG

Nucleotide Sequence
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AAGCAGTCAGGCTCATCCAGGGATC...


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